CRAN Package Check Results for Package OligoSpecificitySystem

Last updated on 2020-12-04 00:48:28 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3 4.73 32.11 36.84 NOTE
r-devel-linux-x86_64-debian-gcc 1.3 3.64 23.52 27.16 NOTE
r-devel-linux-x86_64-fedora-clang 1.3 49.85 NOTE
r-devel-linux-x86_64-fedora-gcc 1.3 41.32 NOTE
r-devel-windows-ix86+x86_64 1.3 5.00 42.00 47.00 NOTE
r-patched-linux-x86_64 1.3 4.28 28.92 33.20 NOTE
r-patched-solaris-x86 1.3 55.70 NOTE
r-release-linux-x86_64 1.3 4.25 28.65 32.90 NOTE
r-release-macos-x86_64 1.3 NOTE
r-release-windows-ix86+x86_64 1.3 5.00 42.00 47.00 NOTE
r-oldrel-macos-x86_64 1.3 NOTE
r-oldrel-windows-ix86+x86_64 1.3 6.00 68.00 74.00 NOTE

Check Details

Version: 1.3
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.3
Check: R code for possible problems
Result: NOTE
    calc2: warning in matrix(nr = 1, nc = 3): partial argument match of
     'nr' to 'nrow'
    calc2: warning in matrix(nr = 1, nc = 3): partial argument match of
     'nc' to 'ncol'
    calc3: warning in matrix(nr = 1, nc = 7): partial argument match of
     'nr' to 'nrow'
    calc3: warning in matrix(nr = 1, nc = 7): partial argument match of
     'nc' to 'ncol'
    OSS: no visible binding for '<<-' assignment to 'ONDB1name'
    OSS: no visible binding for '<<-' assignment to 'ONDB2name'
    OSS: no visible binding for '<<-' assignment to 'ONDB3name'
    OSS: no visible binding for '<<-' assignment to 'ONDB4name'
    OSS : .write: no visible binding for global variable 'ONDB1name'
    OSS : .write: no visible binding for global variable 'ONDB2name'
    OSS : .write: no visible binding for global variable 'ONDB3name'
    OSS : .write: no visible binding for global variable 'ONDB4name'
    OSS : run: no visible binding for global variable 'txt'
    OSS : example1: no visible binding for '<<-' assignment to 'ONDB1name'
    OSS : example1: no visible binding for global variable 'fil'
    OSS : example1: no visible binding for global variable 'separator'
    OSS : example2: no visible binding for '<<-' assignment to 'ONDB2name'
    OSS : example2: no visible binding for global variable 'fil'
    OSS : example2: no visible binding for global variable 'separator'
    OSS : example3: no visible binding for '<<-' assignment to 'ONDB3name'
    OSS : example3: no visible binding for global variable 'fil'
    OSS : example3: no visible binding for global variable 'separator'
    OSS : reset1: no visible binding for '<<-' assignment to 'ONDB1name'
    OSS : reset2: no visible binding for '<<-' assignment to 'ONDB2name'
    OSS : reset3: no visible binding for '<<-' assignment to 'ONDB3name'
    OSS : reset4: no visible binding for '<<-' assignment to 'ONDB4name'
    OSS : OnOk: no visible binding for global variable 'Name'
    OSS : OnOk: no visible binding for global variable 'Namenbseq'
    OSS : calc: no visible binding for global variable 'txt4'
    OSS : calc: no visible binding for global variable 'txt3'
    OSS : dprim: no visible binding for global variable 'txt4'
    OSS : dprim: no visible binding for global variable 'txt3'
    OSS : effic: no visible binding for global variable 'txt4'
    OSS : effic: no visible binding for global variable 'txt3'
    OSS : impr: no visible binding for global variable 'txt4'
    OSS : impr: no visible binding for global variable 'txt3'
    OSS: no visible binding for '<<-' assignment to 'Name'
    OSS: no visible binding for global variable 'Name'
    OSS: no visible binding for '<<-' assignment to 'Namenbseq'
    OSS: no visible binding for global variable 'Namenbseq'
    OnOk: no visible binding for global variable 'Name'
    OnOk: no visible binding for global variable 'Namenbseq'
    calc2: no visible binding for global variable 'txt1'
    calc2: no visible binding for global variable 'txt2'
    calc3: no visible binding for global variable 'txt1'
    calc3: no visible binding for global variable 'txt2'
    calc3: no visible binding for global variable 'txt3'
    concatenate: no visible binding for global variable 'txt3'
    concatenate: no visible binding for global variable 'txt4'
    concatenate: no visible binding for global variable 'txt1'
    concatenate: no visible binding for global variable 'txt2'
    concatenate : calc: no visible binding for '<<-' assignment to 'txt1'
    concatenate : calc: no visible binding for '<<-' assignment to 'txt2'
    concatenate : calc: no visible binding for '<<-' assignment to 'txt3'
    concatenate : calc: no visible binding for '<<-' assignment to
     'ONDB1name'
    concatenate : calc: no visible binding for '<<-' assignment to
     'ONDB2name'
    concatenate : calc: no visible binding for '<<-' assignment to
     'ONDB3name'
    dbb1: no visible binding for '<<-' assignment to 'ONDB1name'
    dbb1: no visible binding for global variable 'separator'
    dbb1: no visible global function definition for 'dev.off'
    dbb2: no visible binding for '<<-' assignment to 'ONDB2name'
    dbb2: no visible binding for global variable 'separator'
    dbb2: no visible global function definition for 'dev.off'
    dbb3: no visible binding for '<<-' assignment to 'ONDB3name'
    dbb3: no visible binding for global variable 'separator'
    dbb3: no visible global function definition for 'dev.off'
    dbb4: no visible binding for global variable 'separator'
    dbb4: no visible global function definition for 'dev.off'
    dbb4: no visible binding for global variable 'txt1'
    dbb4: no visible binding for global variable 'txt2'
    dbb4: no visible binding for global variable 'txt3'
    dbb4: no visible binding for '<<-' assignment to 'ONDB4name'
    degencal2 : temp: no visible global function definition for 'symbols'
    degencal2 : temp: no visible global function definition for 'text'
    degencal2 : temp: no visible binding for global variable 'nbsequence'
    degencal2 : temp: no visible binding for global variable 'zz1'
    degencal3 : temp: no visible global function definition for 'symbols'
    degencal3 : temp: no visible global function definition for 'text'
    degencal3 : temp: no visible binding for global variable 'nbsequence'
    degencal3 : temp: no visible binding for global variable 'zz1'
    degencal4: no visible binding for global variable 'txt1'
    degencal4: no visible binding for global variable 'txt2'
    degencal4: no visible binding for global variable 'txt3'
    degencal4: no visible binding for global variable 'txt4'
    degencal4: no visible binding for global variable 'nbsequence'
    exportglobal: no visible binding for global variable 'txt1'
    exportglobal: no visible binding for global variable 'txt2'
    exportglobal: no visible binding for global variable 'txt3'
    exportglobal: no visible binding for global variable 'newdb'
    glob2d : temp: no visible global function definition for 'symbols'
    glob2d : temp: no visible global function definition for 'text'
    glob2d : temp : normal_prct: no visible global function definition for
     'text'
    glob2d : temp : normal_prct: no visible binding for global variable
     'zz1'
    glob2d : temp : normal_prct: no visible binding for global variable
     'nbsequence'
    glob2d : temp : normal: no visible global function definition for
     'text'
    glob2d : temp : normal: no visible binding for global variable 'zz1'
    glob2d : temp: no visible binding for global variable 'nbsequence'
    glob3d : temp: no visible global function definition for 'symbols'
    glob3d : temp: no visible global function definition for 'text'
    glob3d : temp : normal: no visible global function definition for
     'text'
    glob3d : temp : normal: no visible binding for global variable 'zz1'
    glob3d : temp : normal_prct: no visible global function definition for
     'text'
    glob3d : temp : normal_prct: no visible binding for global variable
     'zz1'
    glob3d : temp : normal_prct: no visible binding for global variable
     'nbsequence'
    glob3d : temp: no visible binding for global variable 'nbsequence'
    impr2d : temp: no visible global function definition for 'symbols'
    impr2d : temp: no visible global function definition for 'text'
    impr2d : temp: no visible binding for global variable 'nbsequence'
    impr2d : temp: no visible binding for global variable 'zz1'
    impr3d : temp: no visible global function definition for 'symbols'
    impr3d : temp: no visible global function definition for 'text'
    impr3d : temp: no visible binding for global variable 'nbsequence'
    impr3d : temp: no visible binding for global variable 'zz1'
    optxt: no visible binding for '<<-' assignment to 'fil'
    optxt: no visible binding for global variable 'bg'
    pcrcal2 : temp: no visible binding for global variable 'zz1'
    pcrcal2 : temp: no visible global function definition for 'symbols'
    pcrcal2 : temp: no visible global function definition for 'text'
    pcrcal2 : temp : normal: no visible global function definition for
     'text'
    pcrcal2 : temp : normal_prct: no visible global function definition for
     'text'
    pcrcal2 : temp : normal_prct: no visible binding for global variable
     'nbsequence'
    pcrcal2 : temp: no visible binding for global variable 'nbsequence'
    pcrcal3 : temp: no visible global function definition for 'symbols'
    pcrcal3 : temp: no visible global function definition for 'text'
    pcrcal3 : temp: no visible binding for global variable 'nbsequence'
    pcrcal3 : temp: no visible binding for global variable 'zz1'
    pcrcal4: no visible binding for global variable 'myfiles'
    pcrcal4: no visible binding for global variable 'txt1'
    pcrcal4: no visible binding for global variable 'txt2'
    pcrcal4: no visible binding for global variable 'txt3'
    pcrcal4: no visible binding for global variable 'txt4'
    pcrcal4: no visible binding for global variable 'nbsequence'
    security: no visible binding for global variable 'txt4'
    security: no visible binding for global variable 'txt1'
    security: no visible binding for global variable 'txt2'
    security: no visible binding for global variable 'txt3'
    waitGUI : temp: no visible global function definition for 'segments'
    waitGUI : temp: no visible global function definition for 'text'
    waitGUI: no visible binding for '<<-' assignment to 'z'
    waitGUI: no visible binding for global variable 'z'
    Undefined global functions or variables:
     Name Namenbseq ONDB1name ONDB2name ONDB3name ONDB4name bg dev.off fil
     myfiles nbsequence newdb segments separator symbols text txt txt1
     txt2 txt3 txt4 z zz1
    Consider adding
     importFrom("grDevices", "dev.off")
     importFrom("graphics", "segments", "symbols", "text")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64

Version: 1.3
Check: R code for possible problems
Result: NOTE
    calc2: warning in matrix(nr = 1, nc = 3): partial argument match of
     'nr' to 'nrow'
    calc2: warning in matrix(nr = 1, nc = 3): partial argument match of
     'nc' to 'ncol'
    calc3: warning in matrix(nr = 1, nc = 7): partial argument match of
     'nr' to 'nrow'
    calc3: warning in matrix(nr = 1, nc = 7): partial argument match of
     'nc' to 'ncol'
    OSS: no visible binding for '<<-' assignment to 'ONDB1name'
    OSS: no visible binding for '<<-' assignment to 'ONDB2name'
    OSS: no visible binding for '<<-' assignment to 'ONDB3name'
    OSS: no visible binding for '<<-' assignment to 'ONDB4name'
    OSS : .write: no visible binding for global variable 'ONDB1name'
    OSS : .write: no visible binding for global variable 'ONDB2name'
    OSS : .write: no visible binding for global variable 'ONDB3name'
    OSS : .write: no visible binding for global variable 'ONDB4name'
    OSS : run: no visible binding for global variable 'txt'
    OSS : example1: no visible binding for '<<-' assignment to 'ONDB1name'
    OSS : example1: no visible binding for global variable 'fil'
    OSS : example1: no visible binding for global variable 'separator'
    OSS : example2: no visible binding for '<<-' assignment to 'ONDB2name'
    OSS : example2: no visible binding for global variable 'fil'
    OSS : example2: no visible binding for global variable 'separator'
    OSS : example3: no visible binding for '<<-' assignment to 'ONDB3name'
    OSS : example3: no visible binding for global variable 'fil'
    OSS : example3: no visible binding for global variable 'separator'
    OSS : reset1: no visible binding for '<<-' assignment to 'ONDB1name'
    OSS : reset2: no visible binding for '<<-' assignment to 'ONDB2name'
    OSS : reset3: no visible binding for '<<-' assignment to 'ONDB3name'
    OSS : reset4: no visible binding for '<<-' assignment to 'ONDB4name'
    OSS : OnOk: no visible binding for global variable 'Name'
    OSS : OnOk: no visible binding for global variable 'Namenbseq'
    OSS : calc: no visible binding for global variable 'txt4'
    OSS : calc: no visible binding for global variable 'txt3'
    OSS : dprim: no visible binding for global variable 'txt4'
    OSS : dprim: no visible binding for global variable 'txt3'
    OSS : effic: no visible binding for global variable 'txt4'
    OSS : effic: no visible binding for global variable 'txt3'
    OSS : impr: no visible binding for global variable 'txt4'
    OSS : impr: no visible binding for global variable 'txt3'
    OSS: no visible binding for '<<-' assignment to 'Name'
    OSS: no visible binding for global variable 'Name'
    OSS: no visible binding for '<<-' assignment to 'Namenbseq'
    OSS: no visible binding for global variable 'Namenbseq'
    OnOk: no visible binding for global variable 'Name'
    OnOk: no visible binding for global variable 'Namenbseq'
    calc2: no visible binding for global variable 'txt1'
    calc2: no visible binding for global variable 'txt2'
    calc3: no visible binding for global variable 'txt1'
    calc3: no visible binding for global variable 'txt2'
    calc3: no visible binding for global variable 'txt3'
    concatenate: no visible binding for global variable 'txt3'
    concatenate: no visible binding for global variable 'txt4'
    concatenate: no visible binding for global variable 'txt1'
    concatenate: no visible binding for global variable 'txt2'
    concatenate : calc: no visible binding for '<<-' assignment to 'txt1'
    concatenate : calc: no visible binding for '<<-' assignment to 'txt2'
    concatenate : calc: no visible binding for '<<-' assignment to 'txt3'
    concatenate : calc: no visible binding for '<<-' assignment to
     'ONDB1name'
    concatenate : calc: no visible binding for '<<-' assignment to
     'ONDB2name'
    concatenate : calc: no visible binding for '<<-' assignment to
     'ONDB3name'
    dbb1: no visible global function definition for 'choose.files'
    dbb1: no visible binding for global variable 'Filters'
    dbb1: no visible binding for '<<-' assignment to 'ONDB1name'
    dbb1: no visible binding for global variable 'separator'
    dbb1: no visible global function definition for 'dev.off'
    dbb2: no visible global function definition for 'choose.files'
    dbb2: no visible binding for global variable 'Filters'
    dbb2: no visible binding for '<<-' assignment to 'ONDB2name'
    dbb2: no visible binding for global variable 'separator'
    dbb2: no visible global function definition for 'dev.off'
    dbb3: no visible global function definition for 'choose.files'
    dbb3: no visible binding for global variable 'Filters'
    dbb3: no visible binding for '<<-' assignment to 'ONDB3name'
    dbb3: no visible binding for global variable 'separator'
    dbb3: no visible global function definition for 'dev.off'
    dbb4: no visible global function definition for 'choose.dir'
    dbb4: no visible binding for global variable 'separator'
    dbb4: no visible global function definition for 'dev.off'
    dbb4: no visible binding for global variable 'txt1'
    dbb4: no visible binding for global variable 'txt2'
    dbb4: no visible binding for global variable 'txt3'
    dbb4: no visible binding for '<<-' assignment to 'ONDB4name'
    degencal2 : temp: no visible global function definition for 'symbols'
    degencal2 : temp: no visible global function definition for 'text'
    degencal2 : temp: no visible binding for global variable 'nbsequence'
    degencal2 : temp: no visible binding for global variable 'zz1'
    degencal3 : temp: no visible global function definition for 'symbols'
    degencal3 : temp: no visible global function definition for 'text'
    degencal3 : temp: no visible binding for global variable 'nbsequence'
    degencal3 : temp: no visible binding for global variable 'zz1'
    degencal4: no visible binding for global variable 'txt1'
    degencal4: no visible binding for global variable 'txt2'
    degencal4: no visible binding for global variable 'txt3'
    degencal4: no visible binding for global variable 'txt4'
    degencal4: no visible binding for global variable 'nbsequence'
    exportglobal: no visible binding for global variable 'txt1'
    exportglobal: no visible binding for global variable 'txt2'
    exportglobal: no visible binding for global variable 'txt3'
    exportglobal: no visible binding for global variable 'newdb'
    glob2d : temp: no visible global function definition for 'symbols'
    glob2d : temp: no visible global function definition for 'text'
    glob2d : temp : normal_prct: no visible global function definition for
     'text'
    glob2d : temp : normal_prct: no visible binding for global variable
     'zz1'
    glob2d : temp : normal_prct: no visible binding for global variable
     'nbsequence'
    glob2d : temp : normal: no visible global function definition for
     'text'
    glob2d : temp : normal: no visible binding for global variable 'zz1'
    glob2d : temp: no visible binding for global variable 'nbsequence'
    glob3d : temp: no visible global function definition for 'symbols'
    glob3d : temp: no visible global function definition for 'text'
    glob3d : temp : normal: no visible global function definition for
     'text'
    glob3d : temp : normal: no visible binding for global variable 'zz1'
    glob3d : temp : normal_prct: no visible global function definition for
     'text'
    glob3d : temp : normal_prct: no visible binding for global variable
     'zz1'
    glob3d : temp : normal_prct: no visible binding for global variable
     'nbsequence'
    glob3d : temp: no visible binding for global variable 'nbsequence'
    impr2d : temp: no visible global function definition for 'symbols'
    impr2d : temp: no visible global function definition for 'text'
    impr2d : temp: no visible binding for global variable 'nbsequence'
    impr2d : temp: no visible binding for global variable 'zz1'
    impr3d : temp: no visible global function definition for 'symbols'
    impr3d : temp: no visible global function definition for 'text'
    impr3d : temp: no visible binding for global variable 'nbsequence'
    impr3d : temp: no visible binding for global variable 'zz1'
    optxt: no visible binding for '<<-' assignment to 'fil'
    optxt: no visible binding for global variable 'bg'
    pcrcal2 : temp: no visible binding for global variable 'zz1'
    pcrcal2 : temp: no visible global function definition for 'symbols'
    pcrcal2 : temp: no visible global function definition for 'text'
    pcrcal2 : temp : normal: no visible global function definition for
     'text'
    pcrcal2 : temp : normal_prct: no visible global function definition for
     'text'
    pcrcal2 : temp : normal_prct: no visible binding for global variable
     'nbsequence'
    pcrcal2 : temp: no visible binding for global variable 'nbsequence'
    pcrcal3 : temp: no visible global function definition for 'symbols'
    pcrcal3 : temp: no visible global function definition for 'text'
    pcrcal3 : temp: no visible binding for global variable 'nbsequence'
    pcrcal3 : temp: no visible binding for global variable 'zz1'
    pcrcal4: no visible binding for global variable 'myfiles'
    pcrcal4: no visible binding for global variable 'txt1'
    pcrcal4: no visible binding for global variable 'txt2'
    pcrcal4: no visible binding for global variable 'txt3'
    pcrcal4: no visible binding for global variable 'txt4'
    pcrcal4: no visible binding for global variable 'nbsequence'
    security: no visible binding for global variable 'txt4'
    security: no visible binding for global variable 'txt1'
    security: no visible binding for global variable 'txt2'
    security: no visible binding for global variable 'txt3'
    waitGUI : temp: no visible global function definition for 'segments'
    waitGUI : temp: no visible global function definition for 'text'
    waitGUI: no visible binding for '<<-' assignment to 'z'
    waitGUI: no visible binding for global variable 'z'
    Undefined global functions or variables:
     Filters Name Namenbseq ONDB1name ONDB2name ONDB3name ONDB4name bg
     choose.dir choose.files dev.off fil myfiles nbsequence newdb segments
     separator symbols text txt txt1 txt2 txt3 txt4 z zz1
    Consider adding
     importFrom("grDevices", "dev.off")
     importFrom("graphics", "segments", "symbols", "text")
     importFrom("utils", "Filters", "choose.dir", "choose.files")
    to your NAMESPACE file.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64

Version: 1.3
Check: R code for possible problems
Result: NOTE
    calc2: warning in matrix(nr = 1, nc = 3): partial argument match of
     'nr' to 'nrow'
    calc2: warning in matrix(nr = 1, nc = 3): partial argument match of
     'nc' to 'ncol'
    calc3: warning in matrix(nr = 1, nc = 7): partial argument match of
     'nr' to 'nrow'
    calc3: warning in matrix(nr = 1, nc = 7): partial argument match of
     'nc' to 'ncol'
    OSS: no visible binding for '<<-' assignment to ‘ONDB1name’
    OSS: no visible binding for '<<-' assignment to ‘ONDB2name’
    OSS: no visible binding for '<<-' assignment to ‘ONDB3name’
    OSS: no visible binding for '<<-' assignment to ‘ONDB4name’
    OSS : .write: no visible binding for global variable ‘ONDB1name’
    OSS : .write: no visible binding for global variable ‘ONDB2name’
    OSS : .write: no visible binding for global variable ‘ONDB3name’
    OSS : .write: no visible binding for global variable ‘ONDB4name’
    OSS : run: no visible binding for global variable ‘txt’
    OSS : example1: no visible binding for '<<-' assignment to ‘ONDB1name’
    OSS : example1: no visible binding for global variable ‘fil’
    OSS : example1: no visible binding for global variable ‘separator’
    OSS : example2: no visible binding for '<<-' assignment to ‘ONDB2name’
    OSS : example2: no visible binding for global variable ‘fil’
    OSS : example2: no visible binding for global variable ‘separator’
    OSS : example3: no visible binding for '<<-' assignment to ‘ONDB3name’
    OSS : example3: no visible binding for global variable ‘fil’
    OSS : example3: no visible binding for global variable ‘separator’
    OSS : reset1: no visible binding for '<<-' assignment to ‘ONDB1name’
    OSS : reset2: no visible binding for '<<-' assignment to ‘ONDB2name’
    OSS : reset3: no visible binding for '<<-' assignment to ‘ONDB3name’
    OSS : reset4: no visible binding for '<<-' assignment to ‘ONDB4name’
    OSS : OnOk: no visible binding for global variable ‘Name’
    OSS : OnOk: no visible binding for global variable ‘Namenbseq’
    OSS : calc: no visible binding for global variable ‘txt4’
    OSS : calc: no visible binding for global variable ‘txt3’
    OSS : dprim: no visible binding for global variable ‘txt4’
    OSS : dprim: no visible binding for global variable ‘txt3’
    OSS : effic: no visible binding for global variable ‘txt4’
    OSS : effic: no visible binding for global variable ‘txt3’
    OSS : impr: no visible binding for global variable ‘txt4’
    OSS : impr: no visible binding for global variable ‘txt3’
    OSS: no visible binding for '<<-' assignment to ‘Name’
    OSS: no visible binding for global variable ‘Name’
    OSS: no visible binding for '<<-' assignment to ‘Namenbseq’
    OSS: no visible binding for global variable ‘Namenbseq’
    OnOk: no visible binding for global variable ‘Name’
    OnOk: no visible binding for global variable ‘Namenbseq’
    calc2: no visible binding for global variable ‘txt1’
    calc2: no visible binding for global variable ‘txt2’
    calc3: no visible binding for global variable ‘txt1’
    calc3: no visible binding for global variable ‘txt2’
    calc3: no visible binding for global variable ‘txt3’
    concatenate: no visible binding for global variable ‘txt3’
    concatenate: no visible binding for global variable ‘txt4’
    concatenate: no visible binding for global variable ‘txt1’
    concatenate: no visible binding for global variable ‘txt2’
    concatenate : calc: no visible binding for '<<-' assignment to ‘txt1’
    concatenate : calc: no visible binding for '<<-' assignment to ‘txt2’
    concatenate : calc: no visible binding for '<<-' assignment to ‘txt3’
    concatenate : calc: no visible binding for '<<-' assignment to
     ‘ONDB1name’
    concatenate : calc: no visible binding for '<<-' assignment to
     ‘ONDB2name’
    concatenate : calc: no visible binding for '<<-' assignment to
     ‘ONDB3name’
    dbb1: no visible binding for global variable ‘Filters’
    dbb1: no visible binding for '<<-' assignment to ‘ONDB1name’
    dbb1: no visible binding for global variable ‘separator’
    dbb1: no visible global function definition for ‘dev.off’
    dbb2: no visible binding for global variable ‘Filters’
    dbb2: no visible binding for '<<-' assignment to ‘ONDB2name’
    dbb2: no visible binding for global variable ‘separator’
    dbb2: no visible global function definition for ‘dev.off’
    dbb3: no visible binding for global variable ‘Filters’
    dbb3: no visible binding for '<<-' assignment to ‘ONDB3name’
    dbb3: no visible binding for global variable ‘separator’
    dbb3: no visible global function definition for ‘dev.off’
    dbb4: no visible binding for global variable ‘separator’
    dbb4: no visible global function definition for ‘dev.off’
    dbb4: no visible binding for global variable ‘txt1’
    dbb4: no visible binding for global variable ‘txt2’
    dbb4: no visible binding for global variable ‘txt3’
    dbb4: no visible binding for '<<-' assignment to ‘ONDB4name’
    degencal2 : temp: no visible global function definition for ‘symbols’
    degencal2 : temp: no visible global function definition for ‘text’
    degencal2 : temp: no visible binding for global variable ‘nbsequence’
    degencal2 : temp: no visible binding for global variable ‘zz1’
    degencal3 : temp: no visible global function definition for ‘symbols’
    degencal3 : temp: no visible global function definition for ‘text’
    degencal3 : temp: no visible binding for global variable ‘nbsequence’
    degencal3 : temp: no visible binding for global variable ‘zz1’
    degencal4: no visible binding for global variable ‘txt1’
    degencal4: no visible binding for global variable ‘txt2’
    degencal4: no visible binding for global variable ‘txt3’
    degencal4: no visible binding for global variable ‘txt4’
    degencal4: no visible binding for global variable ‘nbsequence’
    exportglobal: no visible binding for global variable ‘txt1’
    exportglobal: no visible binding for global variable ‘txt2’
    exportglobal: no visible binding for global variable ‘txt3’
    exportglobal: no visible binding for global variable ‘newdb’
    glob2d : temp: no visible global function definition for ‘symbols’
    glob2d : temp: no visible global function definition for ‘text’
    glob2d : temp : normal_prct: no visible global function definition for
     ‘text’
    glob2d : temp : normal_prct: no visible binding for global variable
     ‘zz1’
    glob2d : temp : normal_prct: no visible binding for global variable
     ‘nbsequence’
    glob2d : temp : normal: no visible global function definition for
     ‘text’
    glob2d : temp : normal: no visible binding for global variable ‘zz1’
    glob2d : temp: no visible binding for global variable ‘nbsequence’
    glob3d : temp: no visible global function definition for ‘symbols’
    glob3d : temp: no visible global function definition for ‘text’
    glob3d : temp : normal: no visible global function definition for
     ‘text’
    glob3d : temp : normal: no visible binding for global variable ‘zz1’
    glob3d : temp : normal_prct: no visible global function definition for
     ‘text’
    glob3d : temp : normal_prct: no visible binding for global variable
     ‘zz1’
    glob3d : temp : normal_prct: no visible binding for global variable
     ‘nbsequence’
    glob3d : temp: no visible binding for global variable ‘nbsequence’
    impr2d : temp: no visible global function definition for ‘symbols’
    impr2d : temp: no visible global function definition for ‘text’
    impr2d : temp: no visible binding for global variable ‘nbsequence’
    impr2d : temp: no visible binding for global variable ‘zz1’
    impr3d : temp: no visible global function definition for ‘symbols’
    impr3d : temp: no visible global function definition for ‘text’
    impr3d : temp: no visible binding for global variable ‘nbsequence’
    impr3d : temp: no visible binding for global variable ‘zz1’
    optxt: no visible binding for '<<-' assignment to ‘fil’
    optxt: no visible binding for global variable ‘bg’
    pcrcal2 : temp: no visible binding for global variable ‘zz1’
    pcrcal2 : temp: no visible global function definition for ‘symbols’
    pcrcal2 : temp: no visible global function definition for ‘text’
    pcrcal2 : temp : normal: no visible global function definition for
     ‘text’
    pcrcal2 : temp : normal_prct: no visible global function definition for
     ‘text’
    pcrcal2 : temp : normal_prct: no visible binding for global variable
     ‘nbsequence’
    pcrcal2 : temp: no visible binding for global variable ‘nbsequence’
    pcrcal3 : temp: no visible global function definition for ‘symbols’
    pcrcal3 : temp: no visible global function definition for ‘text’
    pcrcal3 : temp: no visible binding for global variable ‘nbsequence’
    pcrcal3 : temp: no visible binding for global variable ‘zz1’
    pcrcal4: no visible binding for global variable ‘myfiles’
    pcrcal4: no visible binding for global variable ‘txt1’
    pcrcal4: no visible binding for global variable ‘txt2’
    pcrcal4: no visible binding for global variable ‘txt3’
    pcrcal4: no visible binding for global variable ‘txt4’
    pcrcal4: no visible binding for global variable ‘nbsequence’
    security: no visible binding for global variable ‘txt4’
    security: no visible binding for global variable ‘txt1’
    security: no visible binding for global variable ‘txt2’
    security: no visible binding for global variable ‘txt3’
    waitGUI : temp: no visible global function definition for ‘plot’
    waitGUI : temp: no visible global function definition for ‘segments’
    waitGUI : temp: no visible global function definition for ‘text’
    waitGUI: no visible binding for '<<-' assignment to ‘z’
    waitGUI: no visible binding for global variable ‘z’
    Undefined global functions or variables:
     Filters Name Namenbseq ONDB1name ONDB2name ONDB3name ONDB4name bg
     dev.off fil myfiles nbsequence newdb plot segments separator symbols
     text txt txt1 txt2 txt3 txt4 z zz1
    Consider adding
     importFrom("grDevices", "dev.off")
     importFrom("graphics", "plot", "segments", "symbols", "text")
    to your NAMESPACE file.
Flavor: r-oldrel-macos-x86_64

Version: 1.3
Check: R code for possible problems
Result: NOTE
    calc2: warning in matrix(nr = 1, nc = 3): partial argument match of
     'nr' to 'nrow'
    calc2: warning in matrix(nr = 1, nc = 3): partial argument match of
     'nc' to 'ncol'
    calc3: warning in matrix(nr = 1, nc = 7): partial argument match of
     'nr' to 'nrow'
    calc3: warning in matrix(nr = 1, nc = 7): partial argument match of
     'nc' to 'ncol'
    OSS: no visible binding for '<<-' assignment to 'ONDB1name'
    OSS: no visible binding for '<<-' assignment to 'ONDB2name'
    OSS: no visible binding for '<<-' assignment to 'ONDB3name'
    OSS: no visible binding for '<<-' assignment to 'ONDB4name'
    OSS : .write: no visible binding for global variable 'ONDB1name'
    OSS : .write: no visible binding for global variable 'ONDB2name'
    OSS : .write: no visible binding for global variable 'ONDB3name'
    OSS : .write: no visible binding for global variable 'ONDB4name'
    OSS : run: no visible binding for global variable 'txt'
    OSS : example1: no visible binding for '<<-' assignment to 'ONDB1name'
    OSS : example1: no visible binding for global variable 'fil'
    OSS : example1: no visible binding for global variable 'separator'
    OSS : example2: no visible binding for '<<-' assignment to 'ONDB2name'
    OSS : example2: no visible binding for global variable 'fil'
    OSS : example2: no visible binding for global variable 'separator'
    OSS : example3: no visible binding for '<<-' assignment to 'ONDB3name'
    OSS : example3: no visible binding for global variable 'fil'
    OSS : example3: no visible binding for global variable 'separator'
    OSS : reset1: no visible binding for '<<-' assignment to 'ONDB1name'
    OSS : reset2: no visible binding for '<<-' assignment to 'ONDB2name'
    OSS : reset3: no visible binding for '<<-' assignment to 'ONDB3name'
    OSS : reset4: no visible binding for '<<-' assignment to 'ONDB4name'
    OSS : OnOk: no visible binding for global variable 'Name'
    OSS : OnOk: no visible binding for global variable 'Namenbseq'
    OSS : calc: no visible binding for global variable 'txt4'
    OSS : calc: no visible binding for global variable 'txt3'
    OSS : dprim: no visible binding for global variable 'txt4'
    OSS : dprim: no visible binding for global variable 'txt3'
    OSS : effic: no visible binding for global variable 'txt4'
    OSS : effic: no visible binding for global variable 'txt3'
    OSS : impr: no visible binding for global variable 'txt4'
    OSS : impr: no visible binding for global variable 'txt3'
    OSS: no visible binding for '<<-' assignment to 'Name'
    OSS: no visible binding for global variable 'Name'
    OSS: no visible binding for '<<-' assignment to 'Namenbseq'
    OSS: no visible binding for global variable 'Namenbseq'
    OnOk: no visible binding for global variable 'Name'
    OnOk: no visible binding for global variable 'Namenbseq'
    calc2: no visible binding for global variable 'txt1'
    calc2: no visible binding for global variable 'txt2'
    calc3: no visible binding for global variable 'txt1'
    calc3: no visible binding for global variable 'txt2'
    calc3: no visible binding for global variable 'txt3'
    concatenate: no visible binding for global variable 'txt3'
    concatenate: no visible binding for global variable 'txt4'
    concatenate: no visible binding for global variable 'txt1'
    concatenate: no visible binding for global variable 'txt2'
    concatenate : calc: no visible binding for '<<-' assignment to 'txt1'
    concatenate : calc: no visible binding for '<<-' assignment to 'txt2'
    concatenate : calc: no visible binding for '<<-' assignment to 'txt3'
    concatenate : calc: no visible binding for '<<-' assignment to
     'ONDB1name'
    concatenate : calc: no visible binding for '<<-' assignment to
     'ONDB2name'
    concatenate : calc: no visible binding for '<<-' assignment to
     'ONDB3name'
    dbb1: no visible global function definition for 'choose.files'
    dbb1: no visible binding for global variable 'Filters'
    dbb1: no visible binding for '<<-' assignment to 'ONDB1name'
    dbb1: no visible binding for global variable 'separator'
    dbb1: no visible global function definition for 'dev.off'
    dbb2: no visible global function definition for 'choose.files'
    dbb2: no visible binding for global variable 'Filters'
    dbb2: no visible binding for '<<-' assignment to 'ONDB2name'
    dbb2: no visible binding for global variable 'separator'
    dbb2: no visible global function definition for 'dev.off'
    dbb3: no visible global function definition for 'choose.files'
    dbb3: no visible binding for global variable 'Filters'
    dbb3: no visible binding for '<<-' assignment to 'ONDB3name'
    dbb3: no visible binding for global variable 'separator'
    dbb3: no visible global function definition for 'dev.off'
    dbb4: no visible global function definition for 'choose.dir'
    dbb4: no visible binding for global variable 'separator'
    dbb4: no visible global function definition for 'dev.off'
    dbb4: no visible binding for global variable 'txt1'
    dbb4: no visible binding for global variable 'txt2'
    dbb4: no visible binding for global variable 'txt3'
    dbb4: no visible binding for '<<-' assignment to 'ONDB4name'
    degencal2 : temp: no visible global function definition for 'symbols'
    degencal2 : temp: no visible global function definition for 'text'
    degencal2 : temp: no visible binding for global variable 'nbsequence'
    degencal2 : temp: no visible binding for global variable 'zz1'
    degencal3 : temp: no visible global function definition for 'symbols'
    degencal3 : temp: no visible global function definition for 'text'
    degencal3 : temp: no visible binding for global variable 'nbsequence'
    degencal3 : temp: no visible binding for global variable 'zz1'
    degencal4: no visible binding for global variable 'txt1'
    degencal4: no visible binding for global variable 'txt2'
    degencal4: no visible binding for global variable 'txt3'
    degencal4: no visible binding for global variable 'txt4'
    degencal4: no visible binding for global variable 'nbsequence'
    exportglobal: no visible binding for global variable 'txt1'
    exportglobal: no visible binding for global variable 'txt2'
    exportglobal: no visible binding for global variable 'txt3'
    exportglobal: no visible binding for global variable 'newdb'
    glob2d : temp: no visible global function definition for 'symbols'
    glob2d : temp: no visible global function definition for 'text'
    glob2d : temp : normal_prct: no visible global function definition for
     'text'
    glob2d : temp : normal_prct: no visible binding for global variable
     'zz1'
    glob2d : temp : normal_prct: no visible binding for global variable
     'nbsequence'
    glob2d : temp : normal: no visible global function definition for
     'text'
    glob2d : temp : normal: no visible binding for global variable 'zz1'
    glob2d : temp: no visible binding for global variable 'nbsequence'
    glob3d : temp: no visible global function definition for 'symbols'
    glob3d : temp: no visible global function definition for 'text'
    glob3d : temp : normal: no visible global function definition for
     'text'
    glob3d : temp : normal: no visible binding for global variable 'zz1'
    glob3d : temp : normal_prct: no visible global function definition for
     'text'
    glob3d : temp : normal_prct: no visible binding for global variable
     'zz1'
    glob3d : temp : normal_prct: no visible binding for global variable
     'nbsequence'
    glob3d : temp: no visible binding for global variable 'nbsequence'
    impr2d : temp: no visible global function definition for 'symbols'
    impr2d : temp: no visible global function definition for 'text'
    impr2d : temp: no visible binding for global variable 'nbsequence'
    impr2d : temp: no visible binding for global variable 'zz1'
    impr3d : temp: no visible global function definition for 'symbols'
    impr3d : temp: no visible global function definition for 'text'
    impr3d : temp: no visible binding for global variable 'nbsequence'
    impr3d : temp: no visible binding for global variable 'zz1'
    optxt: no visible binding for '<<-' assignment to 'fil'
    optxt: no visible binding for global variable 'bg'
    pcrcal2 : temp: no visible binding for global variable 'zz1'
    pcrcal2 : temp: no visible global function definition for 'symbols'
    pcrcal2 : temp: no visible global function definition for 'text'
    pcrcal2 : temp : normal: no visible global function definition for
     'text'
    pcrcal2 : temp : normal_prct: no visible global function definition for
     'text'
    pcrcal2 : temp : normal_prct: no visible binding for global variable
     'nbsequence'
    pcrcal2 : temp: no visible binding for global variable 'nbsequence'
    pcrcal3 : temp: no visible global function definition for 'symbols'
    pcrcal3 : temp: no visible global function definition for 'text'
    pcrcal3 : temp: no visible binding for global variable 'nbsequence'
    pcrcal3 : temp: no visible binding for global variable 'zz1'
    pcrcal4: no visible binding for global variable 'myfiles'
    pcrcal4: no visible binding for global variable 'txt1'
    pcrcal4: no visible binding for global variable 'txt2'
    pcrcal4: no visible binding for global variable 'txt3'
    pcrcal4: no visible binding for global variable 'txt4'
    pcrcal4: no visible binding for global variable 'nbsequence'
    security: no visible binding for global variable 'txt4'
    security: no visible binding for global variable 'txt1'
    security: no visible binding for global variable 'txt2'
    security: no visible binding for global variable 'txt3'
    waitGUI : temp: no visible global function definition for 'plot'
    waitGUI : temp: no visible global function definition for 'segments'
    waitGUI : temp: no visible global function definition for 'text'
    waitGUI: no visible binding for '<<-' assignment to 'z'
    waitGUI: no visible binding for global variable 'z'
    Undefined global functions or variables:
     Filters Name Namenbseq ONDB1name ONDB2name ONDB3name ONDB4name bg
     choose.dir choose.files dev.off fil myfiles nbsequence newdb plot
     segments separator symbols text txt txt1 txt2 txt3 txt4 z zz1
    Consider adding
     importFrom("grDevices", "dev.off")
     importFrom("graphics", "plot", "segments", "symbols", "text")
     importFrom("utils", "Filters", "choose.dir", "choose.files")
    to your NAMESPACE file.
Flavor: r-oldrel-windows-ix86+x86_64