Comprehensive toolkit for generating various numerical representation schemes of protein sequence. The descriptors and similarity scores included are extensively used in bioinformatics and chemogenomics. For full functionality, the software 'ncbi-blast+' is needed, see <http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download> for more information.
| Version: | 1.1-1 |
| Suggests: | Biostrings, GOSemSim, foreach, doParallel, org.Hs.eg.db |
| Published: | 2015-12-29 |
| Author: | Nan Xiao, Qingsong Xu, Dongsheng Cao |
| Maintainer: | Nan Xiao <road2stat at gmail.com> |
| BugReports: | https://github.com/road2stat/protr/issues |
| License: | BSD 3-clause License + file LICENSE |
| URL: | https://github.com/road2stat/protr |
| NeedsCompilation: | no |
| SystemRequirements: | ncbi-blast+ (see <http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download>) |
| Citation: | protr citation info |
| Materials: | README NEWS |
| CRAN checks: | protr results |
| Reference manual: | protr.pdf |
| Vignettes: |
protr: R package for generating various numerical representation schemes of protein sequence |
| Package source: | protr_1.1-1.tar.gz |
| Windows binaries: | r-devel: protr_1.1-1.zip, r-release: protr_1.1-1.zip, r-oldrel: protr_1.1-1.zip |
| OS X Mavericks binaries: | r-release: protr_1.1-1.tgz, r-oldrel: protr_1.1-1.tgz |
| Old sources: | protr archive |