hisse: Hidden State Speciation and Extinction

Sets up and executes a HiSSE model (Hidden State Speciation and Extinction) on a phylogeny and character sets to test for hidden shifts in trait dependent rates of diversification.

Version: 1.7
Depends: ape, deSolve, GenSA, subplex, nloptr
Imports: parallel, phytools, data.table, methods
Suggests: testthat, diversitree, knitr
Published: 2016-06-14
Author: Jeremy M. Beaulieu, Brian O'Meara
Maintainer: Jeremy Beaulieu <jbeaulieu at nimbios.org>
BugReports: NA
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
Materials: README
CRAN checks: hisse results


Reference manual: hisse.pdf
Vignettes: Running hisse
Package source: hisse_1.7.tar.gz
Windows binaries: r-devel: hisse_1.7.zip, r-release: hisse_1.7.zip, r-oldrel: hisse_1.7.zip
OS X Mavericks binaries: r-release: hisse_1.7.tgz, r-oldrel: hisse_1.7.tgz
Old sources: hisse archive