TKF: Pairwise Distance Estimation with TKF91 and TKF92 Model

Pairwise evolutionary distance estimation between protein sequences with the TKF91 and TKF92 model, which consider all the possible paths of transforming from one sequence to another.

Version: 0.0.8
Depends: R (≥ 3.0.2)
Imports: methods, expm, numDeriv, ape (≥ 3.2), phytools (≥ 0.4-45), phangorn (≥ 1.99-12)
Suggests: RUnit, seqinr
Published: 2015-04-18
Author: Ge Tan
Maintainer: Ge Tan <ge.tan09 at>
BugReports: NA
License: GPL-2
NeedsCompilation: yes
SystemRequirements: gsl
CRAN checks: TKF results


Reference manual: TKF.pdf
Package source: TKF_0.0.8.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X Mavericks binaries: r-release: TKF_0.0.8.tgz, r-oldrel: TKF_0.0.8.tgz
Old sources: TKF archive