A simple and flexible way to generate Circos 2D track plot images for genomic data visualization is implemented in this package. The types of plots include: heatmap, histogram, lines, scatterplot, tiles and plot items for further decorations include connector, link (lines and ribbons), and text (gene) label. All functions require only R graphics package that comes with R base installation.
| Version: | 1.1.3 |
| Depends: | R (≥ 2.10) |
| Published: | 2015-12-14 |
| Author: | Hongen Zhang |
| Maintainer: | Hongen Zhang <hzhang at mail.nih.gov> |
| BugReports: | NA |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | http://bitbucket.org/henryhzhang/rcircos |
| NeedsCompilation: | no |
| Citation: | RCircos citation info |
| CRAN checks: | RCircos results |
| Reference manual: | RCircos.pdf |
| Vignettes: |
Using_RCircos |
| Package source: | RCircos_1.1.3.tar.gz |
| Windows binaries: | r-devel: RCircos_1.1.3.zip, r-release: RCircos_1.1.3.zip, r-oldrel: RCircos_1.1.3.zip |
| OS X Mavericks binaries: | r-release: RCircos_1.1.3.tgz, r-oldrel: RCircos_1.1.3.tgz |
| Old sources: | RCircos archive |
| Reverse imports: | XGR |