This is a simple package that fits the logistic equation to microbial growth curve data (e.g., repeated absorbance measurements taken from a plate reader over time). From this fit, a variety of metrics are provided, including the maximum growth rate, the doubling time, the carrying capacity, the area under the logistic curve, and the time to the inflection point.
| Version: | 0.1.0 |
| Depends: | R (≥ 2.10) |
| Imports: | caTools (≥ 1.17.1), minpack.lm (≥ 1.1), stats (≥ 3.2.2), graphics (≥ 3.2.2) |
| Suggests: | testthat, knitr, dplyr |
| Published: | 2015-11-04 |
| Author: | Kathleen sprouffske [aut, cre] |
| Maintainer: | Kathleen sprouffske <sprouffske at gmail.com> |
| BugReports: | https://github.com/sprouffske/growthcurver/issues |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://github.com/sprouffske/growthcurver |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | growthcurver results |
| Reference manual: | growthcurver.pdf |
| Vignettes: |
Growthcurver Vignette |
| Package source: | growthcurver_0.1.0.tar.gz |
| Windows binaries: | r-devel: growthcurver_0.1.0.zip, r-release: growthcurver_0.1.0.zip, r-oldrel: not available |
| OS X Snow Leopard binaries: | r-release: growthcurver_0.1.0.tgz, r-oldrel: not available |
| OS X Mavericks binaries: | r-release: growthcurver_0.1.0.tgz |