Requires rooted resolved phylogeny as input and creates a table of genera, their monophyly-status, which taxa cause problems in monophyly etc. Different information can be extracted from the output and a plot function allows visualization of the results in a number of ways.
| Version: | 1.0 |
| Depends: | ape, phytools, phangorn, RColorBrewer, taxize |
| Suggests: | knitr |
| Published: | 2015-10-19 |
| Author: | Orlando Schwery |
| Maintainer: | Orlando Schwery <oschwery at vols.utk.edu> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| CRAN checks: | MonoPhy results |
| Reference manual: | MonoPhy.pdf |
| Vignettes: |
MonoPhy Tutorial |
| Package source: | MonoPhy_1.0.tar.gz |
| Windows binaries: | r-devel: MonoPhy_1.0.zip, r-release: MonoPhy_1.0.zip, r-oldrel: MonoPhy_1.0.zip |
| OS X Snow Leopard binaries: | r-release: MonoPhy_1.0.tgz, r-oldrel: not available |
| OS X Mavericks binaries: | r-release: MonoPhy_1.0.tgz |