sprint: Simple Parallel R INTerface
SPRINT (Simple Parallel R INTerface) is a parallel
framework for R. It provides a High Performance Computing (HPC)
harness which allows R scripts to run on HPC clusters. SPRINT
contains a library of selected R functions that have been
parallelized. Functions are named after the original R function
with the added prefix 'p', i.e. the parallel version of cor()
in SPRINT is called pcor(). Call to the parallel R functions
are included directly in standard R scripts.
SPRINT contains functions for correlation (pcor), partitioning around medoids (ppam),
apply (papply), permutation testing (pmaxT), bootstrapping (pboot), random forest (prandomForest),
rank product (pRP) and hamming distance (pstringdistmatrix).
| Version: |
1.0.7 |
| Depends: |
R (≥ 2.9.2), rlecuyer, ff (≥ 2.1-1), randomForest |
| Imports: |
boot, e1071 |
| Suggests: |
cluster, stringdist, RUnit, Matrix, SparseM, multtest, Biostrings, ShortRead, golubEsets, RankProd |
| OS_type: |
unix |
| Published: |
2014-09-29 |
| Author: |
University of Edinburgh SPRINT Team |
| Maintainer: |
Eilidh Troup <e.troup at epcc.ed.ac.uk> |
| Contact: |
University of Edinburgh SPRINT Team <sprint@ed.ac.uk> |
| License: |
GPL (≥ 3) |
| Copyright: |
University of Edinburgh |
| URL: |
http://www.r-sprint.org |
| NeedsCompilation: |
yes |
| SystemRequirements: |
MPI(>= 2.0) |
| Citation: |
sprint citation info |
| Materials: |
README NEWS |
| CRAN checks: |
sprint results |
Downloads: