The apcluster package implements Frey's and Dueck's Affinity Propagation clustering in R. The algorithms are largely analogous to the Matlab code published by Frey and Dueck. The package further provides leveraged affinity propagation and an algorithm for exemplar-based agglomerative clustering that can also be used to join clusters obtained from affinity propagation. Various plotting functions are available for analyzing clustering results.
| Version: | 1.3.5 |
| Depends: | R (≥ 3.0.0) |
| Imports: | Rcpp (≥ 0.11.1), methods, stats, graphics |
| LinkingTo: | Rcpp |
| Suggests: | kernlab |
| Published: | 2014-06-26 |
| Author: | Ulrich Bodenhofer, Andreas Kothmeier, Johannes Palme |
| Maintainer: | Ulrich Bodenhofer <bodenhofer at bioinf.jku.at> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | http://www.bioinf.jku.at/software/apcluster/ |
| NeedsCompilation: | yes |
| Citation: | apcluster citation info |
| Materials: | NEWS |
| In views: | Cluster |
| CRAN checks: | apcluster results |
| Reference manual: | apcluster.pdf |
| Vignettes: |
An R Package for Affinity Propagation Clustering |
| Package source: | apcluster_1.3.5.tar.gz |
| Windows binaries: | r-devel: apcluster_1.3.5.zip, r-release: apcluster_1.3.5.zip, r-oldrel: apcluster_1.3.5.zip |
| OS X Snow Leopard binaries: | r-release: apcluster_1.3.5.tgz, r-oldrel: apcluster_1.3.5.tgz |
| OS X Mavericks binaries: | r-release: apcluster_1.3.5.tgz |
| Old sources: | apcluster archive |
| Reverse suggests: | pubmed.mineR |