RPPanalyzer: Reads, annotates, and normalizes reverse phase protein array data

Reads in sample description and slide description files and annotates the expression values taken from gpr files. After normalization data can be visualized as boxplot, heatmap or dotplot.

Version: 1.3
Depends: R (≥ 2.14)
Imports: quantreg, limma, lattice, stats4, gam, gplots, grid, ggplot2, Hmisc, Biobase
Published: 2014-06-29
Author: Heiko Mannsperger with contributions of Stephan Gade
Maintainer: Christian Bender <christian.bender at tron-mainz.de>
License: LGPL-2 | LGPL-2.1 | LGPL-3 [expanded from: LGPL]
NeedsCompilation: no
CRAN checks: RPPanalyzer results


Reference manual: RPPanalyzer.pdf
Vignettes: An R Package to read, normalize and visualize RPPA data
Package source: RPPanalyzer_1.3.tar.gz
Windows binaries: r-devel: RPPanalyzer_1.3.zip, r-release: RPPanalyzer_1.3.zip, r-oldrel: RPPanalyzer_1.3.zip
OS X Snow Leopard binaries: r-release: RPPanalyzer_1.3.tgz, r-oldrel: RPPanalyzer_1.3.tgz
OS X Mavericks binaries: r-release: RPPanalyzer_1.3.tgz
Old sources: RPPanalyzer archive