NHMMfdr: Compute FDR under dependence using NHMM

The NHMMfdr package implements the non-homogeneous Hidden Markov Model based FDR control as described in Kuan et al., 2011 for multiple comparison adjustment under dependence. It allows for prior information to be incorporated in the model to improve detection of significant tests.

Version: 1.0.6
Depends: R (≥ 2.10.0), MASS, locfdr
Published: 2014-03-28
Author: Pei Fen Kuan
Maintainer: Pei Fen Kuan <peifen.kuan at stonybrook.edu>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
CRAN checks: NHMMfdr results

Downloads:

Reference manual: NHMMfdr.pdf
Package source: NHMMfdr_1.0.6.tar.gz
Windows binaries: r-devel: NHMMfdr_1.0.6.zip, r-release: NHMMfdr_1.0.6.zip, r-oldrel: NHMMfdr_1.0.6.zip
OS X Snow Leopard binaries: r-release: NHMMfdr_1.0.6.tgz, r-oldrel: NHMMfdr_1.0.6.tgz
OS X Mavericks binaries: r-release: NHMMfdr_1.0.6.tgz