CRAN Package Check Results for Package insideRODE

Last updated on 2014-10-02 01:48:18.

Check Details

Version: 2.0
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘compiler’ ‘deSolve’ ‘lattice’ ‘nlme’
     Please remove these calls from your code.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.0
Check: R code for possible problems
Result: NOTE
    NB: .First.lib is obsolete and will not be used in R >= 3.0.0
    File ‘insideRODE/R/zzz.r’:
     .First.lib calls:
     require(nlme)
     require(lattice)
     require(deSolve)
     require(compiler)
    
    Package startup functions should not change the search path.
    See section ‘Good practice’ in '?.onAttach'.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.0
Check: Rd files
Result: NOTE
    prepare_Rd: cfLSODA.Rd:89-90: Dropping empty section \note
    prepare_Rd: cfLSODA.Rd:87-88: Dropping empty section \seealso
    prepare_Rd: cfLSODE.Rd:68-69: Dropping empty section \note
    prepare_Rd: cfLSODE.Rd:66-67: Dropping empty section \seealso
    prepare_Rd: cfODE.Rd:70-71: Dropping empty section \note
    prepare_Rd: cfODE.Rd:68-69: Dropping empty section \seealso
    prepare_Rd: cfVODE.Rd:69-70: Dropping empty section \note
    prepare_Rd: cfVODE.Rd:67-68: Dropping empty section \seealso
    prepare_Rd: cpLSODA.Rd:162-163: Dropping empty section \note
    prepare_Rd: cpLSODA.Rd:160-161: Dropping empty section \seealso
    prepare_Rd: cpLSODE.Rd:67-68: Dropping empty section \note
    prepare_Rd: cpLSODE.Rd:65-66: Dropping empty section \seealso
    prepare_Rd: cpODE.Rd:71-72: Dropping empty section \note
    prepare_Rd: cpODE.Rd:69-70: Dropping empty section \seealso
    prepare_Rd: cpVODE.Rd:68-69: Dropping empty section \note
    prepare_Rd: cpVODE.Rd:66-67: Dropping empty section \seealso
    prepare_Rd: insideRODE-package.Rd:40-42: Dropping empty section \references
    prepare_Rd: nlmLSODA.Rd:88-89: Dropping empty section \note
    prepare_Rd: nlmLSODA.Rd:86-87: Dropping empty section \seealso
    prepare_Rd: nlmLSODAcp.Rd:60-61: Dropping empty section \note
    prepare_Rd: nlmLSODAcp.Rd:58-59: Dropping empty section \seealso
    prepare_Rd: nlmLSODE.Rd:61-62: Dropping empty section \note
    prepare_Rd: nlmLSODE.Rd:59-60: Dropping empty section \seealso
    prepare_Rd: nlmLSODEcp.Rd:61-62: Dropping empty section \note
    prepare_Rd: nlmLSODEcp.Rd:59-60: Dropping empty section \seealso
    prepare_Rd: nlmODE.Rd:63-64: Dropping empty section \note
    prepare_Rd: nlmODE.Rd:61-62: Dropping empty section \seealso
    prepare_Rd: nlmODEcp.Rd:63-64: Dropping empty section \note
    prepare_Rd: nlmODEcp.Rd:61-62: Dropping empty section \seealso
    prepare_Rd: nlmVODE.Rd:61-62: Dropping empty section \note
    prepare_Rd: nlmVODE.Rd:59-60: Dropping empty section \seealso
    prepare_Rd: nlmVODEcp.Rd:61-62: Dropping empty section \note
    prepare_Rd: nlmVODEcp.Rd:59-60: Dropping empty section \seealso
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.0
Check: Rd line widths
Result: NOTE
    Rd file 'cfLSODA.Rd':
     \usage lines wider than 90 characters:
     cfLSODA(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, dllname = NULL, hmin = 0, hm ... [TRUNCATED]
    
    Rd file 'cfLSODE.Rd':
     \usage lines wider than 90 characters:
     cfLSODE(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, dllname = NULL, hmin = 0, hmax = ... [TRUNCATED]
    
    Rd file 'cfODE.Rd':
     \usage lines wider than 90 characters:
     cfODE(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, dllname = NULL, hmin = 0, hmax = I ... [TRUNCATED]
    
    Rd file 'cfVODE.Rd':
     \usage lines wider than 90 characters:
     cfVODE(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, dllname = NULL, hmin = 0, hmax = ... [TRUNCATED]
    
    Rd file 'cpLSODA.Rd':
     \usage lines wider than 90 characters:
     cpLSODA(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, dllname = NULL, hmin = 0, hm ... [TRUNCATED]
    
    Rd file 'cpLSODE.Rd':
     \usage lines wider than 90 characters:
     cpLSODE(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, dllname = NULL, hmin = 0, hmax = ... [TRUNCATED]
    
    Rd file 'cpODE.Rd':
     \usage lines wider than 90 characters:
     cpODE(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, dllname = NULL, hmin = 0, hmax = I ... [TRUNCATED]
    
    Rd file 'cpVODE.Rd':
     \usage lines wider than 90 characters:
     cpVODE(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, dllname = NULL, hmin = 0, hmax = ... [TRUNCATED]
    
    Rd file 'nlmLSODA.Rd':
     \usage lines wider than 90 characters:
     nlmLSODA(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, hmin = 0, hmax = Inf)
    
    Rd file 'nlmLSODAcp.Rd':
     \usage lines wider than 90 characters:
     nlmLSODAcp(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, hmin = 0, hmax = Inf)
    
    Rd file 'nlmLSODE.Rd':
     \usage lines wider than 90 characters:
     nlmLSODE(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, hmin = 0, hmax = Inf)
    
    Rd file 'nlmLSODEcp.Rd':
     \usage lines wider than 90 characters:
     nlmLSODEcp(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, hmin = 0, hmax = Inf)
    
    Rd file 'nlmODE.Rd':
     \usage lines wider than 90 characters:
     nlmODE(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, hmin = 0, hmax = Inf)
    
    Rd file 'nlmODEcp.Rd':
     \usage lines wider than 90 characters:
     nlmODEcp(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, hmin = 0, hmax = Inf)
    
    Rd file 'nlmVODE.Rd':
     \usage lines wider than 90 characters:
     nlmVODE(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, hmin = 0, hmax = Inf)
    
    Rd file 'nlmVODEcp.Rd':
     \usage lines wider than 90 characters:
     nlmVODEcp(model, data, LogParms = TRUE, JAC = FALSE, SEQ = FALSE,rtol = 1e-4, atol = 1e-4, tcrit = NULL, hmin = 0, hmax = Inf)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64