CRAN Package Check Results for Package curvHDR

Last updated on 2014-10-02 01:48:13.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0-3 3.90 50.79 54.68 NOTE
r-devel-linux-x86_64-debian-gcc 1.0-3 4.19 50.36 54.55 NOTE
r-devel-linux-x86_64-fedora-clang 1.0-3 118.92 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0-3 113.76 NOTE
r-devel-osx-x86_64-clang 1.0-3 100.50 NOTE
r-devel-windows-ix86+x86_64 1.0-3 12.00 71.00 83.00 NOTE
r-patched-linux-x86_64 1.0-3 3.92 55.04 58.96 NOTE
r-patched-solaris-sparc 1.0-3 714.60 NOTE
r-patched-solaris-x86 1.0-3 186.20 NOTE
r-release-linux-ix86 1.0-3 5.32 71.30 76.62 NOTE
r-release-linux-x86_64 1.0-3 4.23 54.69 58.92 NOTE
r-release-osx-x86_64-mavericks 1.0-3 ERROR
r-release-osx-x86_64-snowleopard 1.0-3 NOTE
r-release-windows-ix86+x86_64 1.0-3 14.00 85.00 99.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0-3 15.00 90.00 105.00 NOTE

Check Details

Version: 1.0-3
Check: package dependencies
Result: NOTE
    Depends: includes the non-default packages:
     ‘feature’ ‘flowCore’ ‘geometry’ ‘hdrcde’ ‘ks’ ‘misc3d’ ‘ptinpoly’
     ‘rgl’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64

Version: 1.0-3
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     ‘doc’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0-3
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘feature’ ‘flowCore’ ‘geometry’ ‘hdrcde’ ‘ks’ ‘misc3d’ ‘ptinpoly’
     ‘rgl’
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     ‘feature’ ‘flowCore’ ‘geometry’ ‘hdrcde’ ‘ks’ ‘misc3d’ ‘ptinpoly’
     ‘rgl’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    Unexported objects imported by ':::' calls:
     ‘flowCore:::inpolygon’ ‘misc3d:::t2ve’ ‘misc3d:::vertexTriangles’
     See the note in ?`:::` about the use of this operator.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0-3
Check: R code for possible problems
Result: NOTE
    curvHDRfilter: no visible global function definition for ‘rgl.clear’
    curvHDRfilter: no visible global function definition for ‘rgl.bg’
    curvHDRfilter: no visible global function definition for ‘rgl.spheres’
    curvHDRfilter: no visible global function definition for
     ‘featureSignif’
    curvHDRfilter: no visible global function definition for ‘contour3d’
    curvHDRfilter: no visible global function definition for
     ‘updateTriangles’
    curvHDRfilter: no visible global function definition for
     ‘drawScene.rgl’
    curvHDRfilter: no visible global function definition for ‘convhulln’
    curvHDRfilter: no visible global function definition for ‘pip3d’
    curvHDRfilter: no visible global function definition for ‘hpi’
    curvHDRfilter: no visible global function definition for ‘Hpi.diag’
    curvHDRfilter: no visible global function definition for ‘kde’
    curvHDRfilter: no visible global function definition for ‘hdr’
    curvHDRfilter: no visible global function definition for ‘dpik’
    curvHDRfilter: no visible global function definition for
     ‘contourLevels’
    plot.curvHDRfilter: no visible global function definition for
     ‘drawScene.rgl’
    plot3D: no visible global function definition for ‘rgl.clear’
    plot3D: no visible global function definition for ‘rgl.bg’
    plot3D: no visible global function definition for ‘rgl.texts’
    plot3D: no visible global function definition for ‘rgl.quads’
    plot3D: no visible global function definition for ‘rgl.spheres’
    polyhedronGrow: no visible global function definition for ‘convhulln’
    polyhedronGrow: no visible global function definition for
     ‘makeTriangles’
    rgl.lines3d: no visible global function definition for ‘rgl.clear’
    rgl.lines3d: no visible global function definition for ‘rgl.lines’
    triPolyhCentroid: no visible global function definition for ‘extprod3d’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.0-3
Check: R code for possible problems
Result: NOTE
    curvHDRfilter: warning in rgl.bg(col = "white"): partial argument match
     of ‘col’ to ‘color’
    plot3D: warning in rgl.bg(col = bgCol): partial argument match of ‘col’
     to ‘color’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0-3
Check: package dependencies
Result: ERROR
    Package required but not available: ‘flowCore’
    
    Depends: includes the non-default packages:
     ‘feature’ ‘flowCore’ ‘geometry’ ‘hdrcde’ ‘ks’ ‘misc3d’ ‘ptinpoly’
     ‘rgl’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
    
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks