CRAN Package Check Results for Package cubfits

Last updated on 2014-10-02 01:48:13.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1-0 2.24 29.10 31.34 NOTE
r-devel-linux-x86_64-debian-gcc 0.1-0 2.13 29.65 31.78 NOTE
r-devel-linux-x86_64-fedora-clang 0.1-0 62.41 NOTE
r-devel-linux-x86_64-fedora-gcc 0.1-0 59.12 NOTE
r-devel-osx-x86_64-clang 0.1-0 59.88 NOTE
r-devel-windows-ix86+x86_64 0.1-0 9.00 45.00 54.00 NOTE
r-patched-linux-x86_64 0.1-0 2.39 32.84 35.23 OK
r-patched-solaris-sparc 0.1-0 356.20 OK
r-patched-solaris-x86 0.1-0 81.00 OK
r-release-linux-ix86 0.1-0 3.19 40.50 43.68 OK
r-release-linux-x86_64 0.1-0 2.11 30.97 33.08 OK
r-release-osx-x86_64-mavericks 0.1-0 NOTE
r-release-osx-x86_64-snowleopard 0.1-0 OK
r-release-windows-ix86+x86_64 0.1-0 10.00 48.00 58.00 OK
r-oldrel-windows-ix86+x86_64 0.1-0 11.00 48.00 59.00 OK

Check Details

Version: 0.1-0
Check: R code for possible problems
Result: NOTE
    build.aa.df: no visible binding for global variable ‘.CF.GV’
    build.n: no visible binding for global variable ‘.CF.GV’
    build.reu13.list: no visible binding for global variable ‘.CF.GV’
    build.scuo: no visible binding for global variable ‘.CF.GV’
    build.y: no visible binding for global variable ‘.CF.GV’
    convert.bVec.to.b: no visible binding for global variable ‘.CF.CT’
    convert.bVec.to.b: no visible binding for global variable ‘.CF.GV’
    cubappr: no visible binding for global variable ‘.CF.CONF’
    cubappr: no visible binding for global variable ‘.CF.CT’
    cubappr: no visible binding for global variable ‘.CF.DP’
    cubappr: no visible binding for global variable ‘.cubfitsEnv’
    cubappr: no visible binding for global variable ‘.CF.AC’
    cubfits: no visible binding for global variable ‘.CF.CONF’
    cubfits: no visible binding for global variable ‘.CF.CT’
    cubfits: no visible binding for global variable ‘.CF.DP’
    cubfits: no visible binding for global variable ‘.cubfitsEnv’
    cubfits: no visible binding for global variable ‘.CF.AC’
    cubpred: no visible binding for global variable ‘.CF.CONF’
    cubpred: no visible binding for global variable ‘.CF.CT’
    cubpred: no visible binding for global variable ‘.CF.DP’
    cubpred: no visible binding for global variable ‘.cubfitsEnv’
    cubpred: no visible binding for global variable ‘.CF.AC’
    estimatePhi: no visible binding for global variable ‘.CF.OP’
    estimatePhi: no visible binding for global variable ‘.cubfitsEnv’
    fitMultinom: no visible binding for global variable ‘.cubfitsEnv’
    gen.n: no visible binding for global variable ‘.CF.GV’
    gen.reu13.df: no visible binding for global variable ‘.CF.GV’
    gen.reu13.list: no visible binding for global variable ‘.CF.GV’
    gen.scuo: no visible binding for global variable ‘.CF.GV’
    gen.y: no visible binding for global variable ‘.CF.GV’
    get.color: no visible binding for global variable ‘.CF.PT’
    get.color: no visible binding for global variable ‘.CF.GV’
    get.my.cat: no visible binding for global variable ‘.CF.CT’
    get.my.cat: no visible binding for global variable ‘.cubfitsEnv’
    get.my.coefnames: no visible binding for global variable ‘.cubfitsEnv’
    get.my.drawBConditionalAll: no visible binding for global variable
     ‘.CF.CT’
    get.my.drawBConditionalAll: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.dump: no visible binding for global variable ‘.CF.CT’
    get.my.dump: no visible binding for global variable ‘.cubfitsEnv’
    get.my.estimatePhiAll: no visible binding for global variable ‘.CF.CT’
    get.my.estimatePhiAll: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.estimatePhiOne: no visible binding for global variable ‘.CF.CT’
    get.my.estimatePhiOne: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.fitMultinomAll: no visible binding for global variable ‘.CF.CT’
    get.my.fitMultinomAll: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.fitMultinomOne: no visible binding for global variable ‘.CF.CT’
    get.my.fitMultinomOne: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.logLAll: no visible binding for global variable ‘.CF.CT’
    get.my.logLAll: no visible binding for global variable ‘.cubfitsEnv’
    get.my.logLAllPred: no visible binding for global variable ‘.CF.CT’
    get.my.logLAllPred: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.logPosteriorAll: no visible binding for global variable ‘.CF.CT’
    get.my.logPosteriorAll: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.logPosteriorAllPred: no visible binding for global variable
     ‘.CF.CT’
    get.my.logPosteriorAllPred: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.logdmultinomCodAllR: no visible binding for global variable
     ‘.CF.CT’
    get.my.logdmultinomCodAllR: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.logdmultinomCodOne: no visible binding for global variable
     ‘.CF.CT’
    get.my.logdmultinomCodOne: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.ncoef: no visible binding for global variable ‘.cubfitsEnv’
    get.my.pPropType: no visible binding for global variable ‘.CF.CT’
    get.my.pPropType: no visible binding for global variable ‘.cubfitsEnv’
    get.my.pPropTypeNoObs: no visible binding for global variable ‘.CF.CT’
    get.my.pPropTypeNoObs: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.print: no visible binding for global variable ‘.CF.CT’
    get.my.print: no visible binding for global variable ‘.cubfitsEnv’
    get.my.proposePhiAll: no visible binding for global variable ‘.CF.CT’
    get.my.proposePhiAll: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.proposePhiAllPred: no visible binding for global variable
     ‘.CF.CT’
    get.my.proposePhiAllPred: no visible binding for global variable
     ‘.cubfitsEnv’
    get.my.stop: no visible binding for global variable ‘.CF.CT’
    get.my.stop: no visible binding for global variable ‘.cubfitsEnv’
    get.my.update.DrawScale: no visible binding for global variable
     ‘.CF.CT’
    get.my.update.DrawScale: no visible binding for global variable
     ‘.cubfitsEnv’
    init.function: no visible binding for global variable ‘.CF.CT’
    init.function: no visible binding for global variable ‘.cubfitsEnv’
    mixnormerr.nlogL: no visible binding for global variable ‘.CO.CT’
    my.DrawScale.scaling: no visible binding for global variable
     ‘.cubfitsEnv’
    my.DrawScale.scaling: no visible binding for global variable ‘.CF.AC’
    my.DrawScale.scaling : <anonymous>: no visible binding for global
     variable ‘.CF.AC’
    my.cubappr: no visible binding for global variable ‘.CF.CONF’
    my.cubappr: no visible binding for global variable ‘.CF.CT’
    my.cubappr: no visible binding for global variable ‘.CF.DP’
    my.cubappr: no visible binding for global variable ‘.cubfitsEnv’
    my.cubappr: no visible binding for global variable ‘.CF.AC’
    my.cubfits: no visible binding for global variable ‘.CF.CONF’
    my.cubfits: no visible binding for global variable ‘.CF.CT’
    my.cubfits: no visible binding for global variable ‘.CF.DP’
    my.cubfits: no visible binding for global variable ‘.cubfitsEnv’
    my.cubfits: no visible binding for global variable ‘.CF.AC’
    my.cubpred: no visible binding for global variable ‘.CF.CONF’
    my.cubpred: no visible binding for global variable ‘.CF.CT’
    my.cubpred: no visible binding for global variable ‘.CF.DP’
    my.cubpred: no visible binding for global variable ‘.cubfitsEnv’
    my.cubpred: no visible binding for global variable ‘.CF.AC’
    my.drawBConditionalAll.current: no visible binding for global variable
     ‘.cubfitsEnv’
    my.drawBConditionalAll.random: no visible binding for global variable
     ‘.cubfitsEnv’
    my.drawBConditionalFit.MH: no visible binding for global variable
     ‘.cubfitsEnv’
    my.drawPhiConditionalAll: no visible binding for global variable
     ‘.cubfitsEnv’
    my.drawPhiConditionalAllPred: no visible binding for global variable
     ‘.cubfitsEnv’
    my.dump.lapply: no visible binding for global variable ‘.CF.DP’
    my.dump.mclapply: no visible binding for global variable ‘.CF.DP’
    my.estimatePhiAll.lapply: no visible binding for global variable
     ‘.CF.OP’
    my.estimatePhiAll.lapply : <anonymous>: no visible binding for global
     variable ‘.cubfitsEnv’
    my.estimatePhiAll.mclapply: no visible binding for global variable
     ‘.CF.OP’
    my.estimatePhiAll.mclapply : <anonymous>: no visible binding for global
     variable ‘.cubfitsEnv’
    my.estimatePhiAll.pbdLapply: no visible binding for global variable
     ‘.CF.OP’
    my.estimatePhiAll.pbdLapply : <anonymous>: no visible binding for
     global variable ‘.cubfitsEnv’
    my.estimatePhiAll.task.pull: no visible binding for global variable
     ‘.CF.OP’
    my.estimatePhiAll.task.pull : <anonymous>: no visible binding for
     global variable ‘.cubfitsEnv’
    my.estimatePhiOne.MLE.nsef: no visible binding for global variable
     ‘.CF.OP’
    my.estimatePhiOne.MLE.roc: no visible binding for global variable
     ‘.CF.OP’
    my.estimatePhiOne.MLE.rocnsef: no visible binding for global variable
     ‘.CF.OP’
    my.estimatePhiOne.PM.nsef: no visible binding for global variable
     ‘.CF.OP’
    my.estimatePhiOne.PM.roc: no visible binding for global variable
     ‘.CF.OP’
    my.estimatePhiOne.PM.rocnsef: no visible binding for global variable
     ‘.CF.OP’
    my.fitMultinomAll.lapply : <anonymous>: no visible binding for global
     variable ‘.cubfitsEnv’
    my.fitMultinomAll.mclapply : <anonymous>: no visible binding for global
     variable ‘.cubfitsEnv’
    my.fitMultinomAll.pbdLapply : <anonymous>: no visible binding for
     global variable ‘.cubfitsEnv’
    my.fitMultinomAll.task.pull : <anonymous>: no visible binding for
     global variable ‘.cubfitsEnv’
    my.init.function: no visible binding for global variable ‘.CF.CT’
    my.init.function: no visible binding for global variable ‘.cubfitsEnv’
    my.logLAll.lognormal: no visible binding for global variable
     ‘.cubfitsEnv’
    my.logLAllPred.lognormal: no visible binding for global variable
     ‘.cubfitsEnv’
    my.logPosteriorAll.logmixture: no visible binding for global variable
     ‘.cubfitsEnv’
    my.logPosteriorAll.lognormal: no visible binding for global variable
     ‘.cubfitsEnv’
    my.logPosteriorAllPred.logmixture: no visible binding for global
     variable ‘.cubfitsEnv’
    my.logPosteriorAllPred.lognormal: no visible binding for global
     variable ‘.cubfitsEnv’
    my.logdmultinomCodAllR.lapply : <anonymous>: no visible binding for
     global variable ‘.cubfitsEnv’
    my.logdmultinomCodAllR.mclapply : <anonymous>: no visible binding for
     global variable ‘.cubfitsEnv’
    my.logdmultinomCodAllR.pbdLapply : <anonymous>: no visible binding for
     global variable ‘.cubfitsEnv’
    my.propose.sigma.Phi.Gamma: no visible binding for global variable
     ‘.CF.PARAM’
    my.set.acceptance: no visible binding for global variable ‘.CF.DP’
    my.set.adaptive: no visible binding for global variable ‘.CF.AC’
    my.set.adaptive: no visible binding for global variable ‘.CF.CT’
    my.update.acceptance: no visible binding for global variable ‘.CF.DP’
    my.verbose: no visible binding for global variable ‘.CF.DP’
    plotbin: no visible binding for global variable ‘.CF.GV’
    plotmodel: no visible binding for global variable ‘.CF.GV’
    prop.model.roc: no visible binding for global variable ‘.CF.GV’
    scuo.random: no visible binding for global variable ‘.CF.PARAM’
    simu.orf: no visible binding for global variable ‘.CF.CT’
    simu.orf: no visible binding for global variable ‘.CF.GV’
    simu.orf.nsef: no visible binding for global variable ‘.CF.GV’
    simu.orf.roc: no visible binding for global variable ‘.CF.GV’
    simu.orf.rocnsef: no visible binding for global variable ‘.CF.GV’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 0.1-0
Check: package dependencies
Result: NOTE
    Package which this enhances but not available for checking: ‘pbdMPI’
Flavor: r-release-osx-x86_64-mavericks

Version: 0.1-0
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'cubfits-guide.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `a4wide.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    ./cubfits-include/jss.cls:72: ==> Fatal error occurred, no output PDF file pro
    duced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64-mavericks