CRAN Package Check Results for Package aspace

Last updated on 2014-10-02 01:48:11.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	3.2	1.68	24.43	26.12	NOTE
r-devel-linux-x86_64-debian-gcc	3.2	1.54	24.14	25.68	NOTE
r-devel-linux-x86_64-fedora-clang	3.2			55.27	NOTE
r-devel-linux-x86_64-fedora-gcc	3.2			52.75	NOTE
r-devel-osx-x86_64-clang	3.2			50.93	NOTE
r-devel-windows-ix86+x86_64	3.2	8.00	42.00	50.00	NOTE
r-patched-linux-x86_64	3.2	1.64	25.61	27.25	NOTE
r-patched-solaris-sparc	3.2			294.80	NOTE
r-patched-solaris-x86	3.2			73.70	NOTE
r-release-linux-ix86	3.2	2.20	36.08	38.28	NOTE
r-release-linux-x86_64	3.2	1.72	25.96	27.68	NOTE
r-release-osx-x86_64-mavericks	3.2				NOTE
r-release-osx-x86_64-snowleopard	3.2				NOTE
r-release-windows-ix86+x86_64	3.2	8.00	45.00	53.00	NOTE
r-oldrel-windows-ix86+x86_64	3.2	9.00	48.00	57.00	NOTE

Check Details

Version: 3.2
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘Hmisc’ ‘splancs’
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     ‘Hmisc’ ‘shapefiles’ ‘splancs’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 3.2
Check: R code for possible problems
Result: NOTE
    CF: no visible binding for global variable ‘activities’
    CF2PTS: no visible binding for global variable ‘activities’
    CF2PTS: no visible binding for global variable ‘activities2’
    CMD: no visible binding for global variable ‘activities’
    CMD: no visible global function definition for ‘gridpts’
    calc_box: no visible binding for global variable ‘activities’
    calc_box: no visible global function definition for ‘wtd.var’
    calc_sdd: no visible binding for global variable ‘activities’
    calc_sde: no visible binding for global variable ‘activities’
    distances: no visible binding for global variable ‘centre’
    distances: no visible binding for global variable ‘activities’
    mean_centre: no visible binding for global variable ‘activities’
    median_centre: no visible binding for global variable ‘activities’
    plot_box: no visible binding for global variable ‘r.BOX’
    plot_centres: no visible binding for global variable ‘r.SDE’
    plot_centres: no visible binding for global variable ‘r.CF’
    plot_centres: no visible binding for global variable ‘r.median’
    plot_centres: no visible binding for global variable ‘r.CMD’
    plot_centres: no visible binding for global variable ‘r.CF2PTS’
    plot_sdd: no visible binding for global variable ‘r.SDD’
    plot_sde: no visible binding for global variable ‘r.SDE’

    Found the following assignments to the global environment:
    File ‘aspace/R/CF.R’:
     assign("cfloc", cfloc, pos = 1)
     assign("r.CF", r.CF, pos = 1)
     assign("cfatt", result.CF, pos = 1)
    File ‘aspace/R/CF2PTS.R’:
     assign("cf2ptsloc", cf2ptsloc, pos = 1)
     assign("r.CF2PTS", r.CF2PTS, pos = 1)
     assign("cf2ptsatt", result.CF2PTS, pos = 1)
    File ‘aspace/R/CMD.R’:
     assign("cmdloc", cmdloc, pos = 1)
     assign("r.CMD", r.CMD, pos = 1)
     assign("cmdatt", result.CMD, pos = 1)
    File ‘aspace/R/calc_box.R’:
     assign("boxloc", boxloc, pos = 1)
     assign("r.BOX", r.BOX, pos = 1)
     assign("boxatt", result.box, pos = 1)
    File ‘aspace/R/calc_sdd.R’:
     assign("sddloc", sddloc, pos = 1)
     assign("r.SDD", r.SDD, pos = 1)
     assign("sddatt", result.sdd, pos = 1)
    File ‘aspace/R/calc_sde.R’:
     assign("r.SDE", r.SDE, pos = 1)
     assign("sdeatt", result.sde, pos = 1)
     assign("sdeloc", sdeloc, pos = 1)
    File ‘aspace/R/mean_centre.R’:
     assign("meanloc", meanloc, pos = 1)
     assign("r.mean", r.mean, pos = 1)
     assign("meanatt", result.mean, pos = 1)
    File ‘aspace/R/median_centre.R’:
     assign("medianloc", medianloc, pos = 1)
     assign("r.median", r.median, pos = 1)
     assign("medianatt", result.median, pos = 1)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-osx-x86_64-clang

Version: 3.2
Check: Rd line widths
Result: NOTE
    Rd file 'calc_box.Rd':
     \examples lines wider than 100 characters:
     ## plot_box by default takes as input the result produced from the calc_box, read from the current workspace.

    Rd file 'calc_sdd.Rd':
     \examples lines wider than 100 characters:
     ## plot_sdd by default takes as input the result produced from the calc_sdd, read from the current workspace.

    Rd file 'calc_sde.Rd':
     \examples lines wider than 100 characters:
     ## plot_sde by default takes as input the result produced from the calc_sde, read from the current workspace.

    Rd file 'centre.Rd':
     \examples lines wider than 100 characters:
     ## plot_centres by default takes as input the result produced from mean_centre, median centre, CF, CF2PTS, and CMD, read from the curre ... [TRUNCATED]

    Rd file 'plot_box.Rd':
     \examples lines wider than 100 characters:
     ## plot_box by default takes as input the result produced from the calc_box, read from the current workspace.

    Rd file 'plot_centres.Rd':
     \examples lines wider than 100 characters:
     ## plot_centres by default takes as input the result produced from CF, CF2PTS, and CMD, read from the current workspace.

    Rd file 'plot_sdd.Rd':
     \examples lines wider than 100 characters:
     ## plot_sdd by default takes as input the result produced from the calc_sdd, read from the current workspace.

    Rd file 'plot_sde.Rd':
     \examples lines wider than 100 characters:
     ## plot_sde by default takes as input the result produced from the calc_sde, read from the current workspace.

    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 3.2
Check: R code for possible problems
Result: NOTE
    plot_centres: no visible binding for global variable ‘r.CF’
    plot_centres: no visible binding for global variable ‘r.median’
    plot_centres: no visible binding for global variable ‘r.CMD’
    plot_centres: no visible binding for global variable ‘r.CF2PTS’

    Found the following assignments to the global environment:
    File ‘aspace/R/CF.R’:
     assign("cfloc", cfloc, pos = 1)
     assign("r.CF", r.CF, pos = 1)
     assign("cfatt", result.CF, pos = 1)
    File ‘aspace/R/CF2PTS.R’:
     assign("cf2ptsloc", cf2ptsloc, pos = 1)
     assign("r.CF2PTS", r.CF2PTS, pos = 1)
     assign("cf2ptsatt", result.CF2PTS, pos = 1)
    File ‘aspace/R/CMD.R’:
     assign("cmdloc", cmdloc, pos = 1)
     assign("r.CMD", r.CMD, pos = 1)
     assign("cmdatt", result.CMD, pos = 1)
    File ‘aspace/R/calc_box.R’:
     assign("boxloc", boxloc, pos = 1)
     assign("r.BOX", r.BOX, pos = 1)
     assign("boxatt", result.box, pos = 1)
    File ‘aspace/R/calc_sdd.R’:
     assign("sddloc", sddloc, pos = 1)
     assign("r.SDD", r.SDD, pos = 1)
     assign("sddatt", result.sdd, pos = 1)
    File ‘aspace/R/calc_sde.R’:
     assign("r.SDE", r.SDE, pos = 1)
     assign("sdeatt", result.sde, pos = 1)
     assign("sdeloc", sdeloc, pos = 1)
    File ‘aspace/R/mean_centre.R’:
     assign("meanloc", meanloc, pos = 1)
     assign("r.mean", r.mean, pos = 1)
     assign("meanatt", result.mean, pos = 1)
    File ‘aspace/R/median_centre.R’:
     assign("medianloc", medianloc, pos = 1)
     assign("r.median", r.median, pos = 1)
     assign("medianatt", result.median, pos = 1)
Flavors: r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64

Version: 3.2
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     'Hmisc' 'splancs'
     Please remove these calls from your code.
    See the information on DESCRIPTION files in the chapter 'Creating R
    packages' of the 'Writing R Extensions' manual.
Flavor: r-release-osx-x86_64-snowleopard