CRAN Package Check Results for Package MSIseq

Last updated on 2014-10-02 01:48:21.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.99.1 5.93 1011.30 1017.22 OK
r-devel-linux-x86_64-debian-gcc 0.99.1 5.71 1004.72 1010.43 OK
r-devel-linux-x86_64-fedora-clang 0.99.1 161.65 OK --no-vignettes
r-devel-linux-x86_64-fedora-gcc 0.99.1 162.16 OK --no-vignettes
r-devel-osx-x86_64-clang 0.99.1 121.59 OK --no-vignettes
r-devel-windows-ix86+x86_64 0.99.1 15.00 1385.00 1400.00 OK
r-patched-linux-x86_64 0.99.1 7.21 974.32 981.53 OK
r-patched-solaris-sparc 0.99.1 637.50 OK --no-examples --no-vignettes
r-patched-solaris-x86 0.99.1 167.30 OK --no-examples --no-vignettes
r-release-linux-ix86 0.99.1 5.94 190.45 196.39 ERROR
r-release-linux-x86_64 0.99.1 5.22 988.66 993.88 OK
r-release-osx-x86_64-mavericks 0.99.1 OK
r-release-osx-x86_64-snowleopard 0.99.1 OK
r-release-windows-ix86+x86_64 0.99.1 13.00 1315.00 1328.00 OK

Check Details

Version: 0.99.1
Check: running R code from vignettes
Result: ERROR
    Errors in running code in vignettes:
    when running code in ‘MSIseq.Rnw’
     ...
    2 TCGA-D1-A17D endometrial
    3 TCGA-BG-A0MQ endometrial
    4 TCGA-BS-A0U9 endometrial
    5 TCGA-D1-A16D endometrial
    6 TCGA-BG-A0M7 endometrial
    
    > train.mutationNum <- Compute.input.variables(NGStraindata,
    + repeats = Hg19repeats, seq.len = NGStrainseqLen)
    
    ... incomplete output. Crash?
Flavor: r-release-linux-ix86