Provides tools for analyzing adverse outcome pathways (AOPs) for pharmacological and toxicological research. Functionality includes the ability to perform causal network analysis of networks developed in and exported from Cytoscape or existing as R graph objects, and identifying the point of departure/screening/risk value from concentration- response data.

Documentation

Manual: aop.pdf
Vignettes:

Maintainer: Lyle D. Burgoon <Lyle.D.Burgoon at usace.army.mil>

Author(s): Lyle D. Burgoon <Lyle.D.Burgoon at usace.army.mil>

Install package and any missing dependencies by running this line in your R console:

install.packages("aop")

Depends
Imports graph (>= 1.38.3), rjson(>=0.2.14), igraph(>=0.7.1), Rgraphviz (>= 2.10.0), methods, plyr(>=1.8.3), ggplot2(>=1.0.1), splines
Suggests RUnit, knitr, rmarkdown, BiocGenerics
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Package aop
Materials
URL
Task Views
Version 1.0.0
Published 2016-12-05
License CC0
BugReports
SystemRequirements
NeedsCompilation no
Citation
CRAN checks aop check results
Package source aop_1.0.0.tar.gz