A simple R wrapper for the Java BiBit algorithm from "A biclustering algorithm for extracting bit-patterns from binary datasets" from Domingo et al. (2011) . An simple adaption for the BiBit algorithm which allows noise in the biclusters is also introduced as well as a function to guide the algorithm towards given (sub)patterns. Further, a workflow to derive noisy biclusters from discoverd larger column patterns is included as well.

Documentation

Manual: BiBitR.pdf
Vignette: None available.

Maintainer: De Troyer Ewoud <ewoud.detroyer at uhasselt.be>

Author(s): De Troyer Ewoud

Install package and any missing dependencies by running this line in your R console:

install.packages("BiBitR")

Depends
Imports stats, foreign, methods, utils, viridis, cluster, dendextend, lattice, grDevices, graphics, randomcoloR, biclust
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depends
RcmdrPlugin.BiclustGUI
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imports
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Package BiBitR
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Version 0.3.1
Published 2017-06-30
License GPL-3
BugReports
SystemRequirements Java
NeedsCompilation no
Citation
CRAN checks BiBitR check results
Package source BiBitR_0.3.1.tar.gz